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  5. Cpa|evm.model.tig00000737.24

Cpa|evm.model.tig00000737.24


No description available


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000737.24
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00238660 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g20300,... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.01 OrthoFinder output from all 47 species
AT3G16010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G14820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G18390 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g098770 OTP82 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g03187 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g02334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54972 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g04415 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g15608 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g17604 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g39755 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g14296 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g58420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24863.t1 Aspi01Gene24863 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63897.t1 Aspi01Gene63897 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g10252 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g23699 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.01 OrthoFinder output from all 47 species
Ceric.09G082800.1 Ceric.09G082800 not classified & original description: pacid=50587508... 0.01 OrthoFinder output from all 47 species
Ceric.24G045100.1 Ceric.24G045100 not classified & original description: pacid=50628969... 0.01 OrthoFinder output from all 47 species
Dac_g07047 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g03049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04707 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05532 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06272 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g09454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09971 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.01 OrthoFinder output from all 47 species
Dcu_g34156 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g39023 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g11888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002056001 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.01 OrthoFinder output from all 47 species
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.01 OrthoFinder output from all 47 species
GSVIVT01014289001 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.01 OrthoFinder output from all 47 species
GSVIVT01017111001 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.01 OrthoFinder output from all 47 species
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.01 OrthoFinder output from all 47 species
GSVIVT01026360001 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.01 OrthoFinder output from all 47 species
GSVIVT01026463001 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.01 OrthoFinder output from all 47 species
GSVIVT01027384001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.02 OrthoFinder output from all 47 species
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.01 OrthoFinder output from all 47 species
Gb_05336 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_11871 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.01 OrthoFinder output from all 47 species
Gb_21477 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.01 OrthoFinder output from all 47 species
Gb_23459 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.01 OrthoFinder output from all 47 species
Gb_39082 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05860.1 LOC_Os01g05860 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os01g60010.1 LOC_Os01g60010 Pentatricopeptide repeat-containing protein At5g15010,... 0.01 OrthoFinder output from all 47 species
LOC_Os02g52220.1 LOC_Os02g52220 Pentatricopeptide repeat-containing protein At1g73400,... 0.01 OrthoFinder output from all 47 species
LOC_Os03g11020.1 LOC_Os03g11020 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Lfl_g07415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432868g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
MA_10433557g0010 No alias Pentatricopeptide repeat-containing protein At2g27800,... 0.01 OrthoFinder output from all 47 species
MA_12748g0020 No alias Pentatricopeptide repeat-containing protein At1g79540... 0.01 OrthoFinder output from all 47 species
MA_128052g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.01 OrthoFinder output from all 47 species
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.01 OrthoFinder output from all 47 species
MA_38485g0010 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
MA_39587g0010 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.01 OrthoFinder output from all 47 species
MA_69152g0010 MEE40 Pentatricopeptide repeat-containing protein At3g53700,... 0.01 OrthoFinder output from all 47 species
MA_8206159g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.01 OrthoFinder output from all 47 species
MA_845827g0010 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.01 OrthoFinder output from all 47 species
MA_86372g0020 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.01 OrthoFinder output from all 47 species
MA_92274g0010 No alias Pentatricopeptide repeat-containing protein At1g63400... 0.01 OrthoFinder output from all 47 species
MA_953698g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Msp_g01171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08820 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06739 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g06557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08945 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g14223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14416 PPR40 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014467 No alias not classified & original description: CDS=1-2058 0.02 OrthoFinder output from all 47 species
Sam_g14954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24193 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g097730.4.1 Solyc01g097730 Pentatricopeptide repeat-containing protein At3g60050... 0.01 OrthoFinder output from all 47 species
Solyc03g116540.1.1 Solyc03g116540 Pentatricopeptide repeat-containing protein At1g52640,... 0.01 OrthoFinder output from all 47 species
Solyc03g117570.3.1 Solyc03g117570 Pentatricopeptide repeat-containing protein At1g80880,... 0.01 OrthoFinder output from all 47 species
Solyc04g076370.4.1 Solyc04g076370 Pentatricopeptide repeat-containing protein At2g27800,... 0.01 OrthoFinder output from all 47 species
Solyc09g097840.2.1 Solyc09g097840 Pentatricopeptide repeat-containing protein At5g18390,... 0.01 OrthoFinder output from all 47 species
Solyc11g071670.2.1 Solyc11g071670 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Tin_g02821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005446_P003 Zm00001e005446 group-II intron mitochondrial splicing factor (MISF68) 0.01 OrthoFinder output from all 47 species
Zm00001e005758_P001 Zm00001e005758 Pentatricopeptide repeat-containing protein At1g77360,... 0.01 OrthoFinder output from all 47 species
Zm00001e006773_P001 Zm00001e006773 Pentatricopeptide repeat-containing protein At1g80550,... 0.01 OrthoFinder output from all 47 species
Zm00001e025816_P001 Zm00001e025816 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Zm00001e026896_P001 Zm00001e026896 Pentatricopeptide repeat-containing protein At3g62470,... 0.01 OrthoFinder output from all 47 species
Zm00001e028873_P001 Zm00001e028873 Pentatricopeptide repeat-containing protein At5g15010,... 0.01 OrthoFinder output from all 47 species
Zm00001e031478_P001 Zm00001e031478 Pentatricopeptide repeat-containing protein At3g62470,... 0.01 OrthoFinder output from all 47 species
Zm00001e036197_P001 Zm00001e036197 Pentatricopeptide repeat-containing protein At1g71060,... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 502 531
IPR002885 Pentatricopeptide_repeat 465 490
No external refs found!