Cpa|evm.model.tig00000718.65


Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA3 component


Gene families : OG0005363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005363_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000718.65
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT3G52630 No alias Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015931 No alias component *(RPA3) of RPA presynaptic filament assembly... 0.05 OrthoFinder output from all 47 species
GSVIVT01000981001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.05 OrthoFinder output from all 47 species
Gb_31704 No alias component RPA3 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Gb_36734 No alias component RPA3 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Mp8g07790.1 No alias component RPA3 of single-stranded-DNA binding RPA... 0.08 OrthoFinder output from all 47 species
Sam_g07233 No alias component *(RPA3) of RPA presynaptic filament assembly... 0.01 OrthoFinder output from all 47 species
Spa_g18698 No alias component *(RPA3) of RPA presynaptic filament assembly... 0.01 OrthoFinder output from all 47 species
Tin_g00374 No alias component *(RPA3) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Zm00001e017245_P001 Zm00001e017245 component RPA3 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR013970 Rfa2 10 89
No external refs found!