Cpa|evm.model.tig00000718.3 (ATMRP8, MRP8, ABCC6)

Aliases : ATMRP8, MRP8, ABCC6

Description : ABC transporter C family member 6 OS=Arabidopsis thaliana

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000718.3
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Aev_g42688	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g19281	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g06133	ATMRP14, ABCC10, MRP14	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g50934	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g59785	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene04343.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene13119.t1	MRP11, ABCC13,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene64348.t1	ABCC1, ATABCC1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0007.g010848	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=144-3896	0.01	OrthoFinder output from all 47 species
Cba_g04097	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.10G027600.1	ABCC12, MRP13,...	subfamily ABCC transporter & original description:...	0.01	OrthoFinder output from all 47 species
Cre02.g103250	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cre13.g564900	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Cre17.g734612	AtABCC2, ABCC2,...	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dcu_g04991	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g26856	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10564	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01016880001	MRP6, ATMRP6, ABCC8	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
GSVIVT01019475001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_16147	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
LOC_Os01g07870.1	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.01	OrthoFinder output from all 47 species
LOC_Os05g10730.1	MRP6, ATMRP6,...	subfamily ABCC transporter	0.01	OrthoFinder output from all 47 species
Len_g22379	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05737	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g08921	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g38983	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
MA_10435779g0020	MRP15, ABCC15, ATMRP15	ABC transporter C family member 9 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Mp4g11950.1	ATABCC5, MRP5,...	subfamily ABCC transporter	0.01	OrthoFinder output from all 47 species
Mp5g06790.1	ABCC1, ATABCC1,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Mp5g13190.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.01	OrthoFinder output from all 47 species
Msp_g39940	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g43737	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g24428	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32956	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g15997	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g56076	AtABCC2, ABCC2,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g12667	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018952	ABCC1, ATABCC1,...	subfamily ABCC transporter & original description: CDS=3252-4655	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023247	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=228-4094	0.01	OrthoFinder output from all 47 species
Tin_g28945	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	50	160

External Links

No external refs found!

Cpa|evm.model.tig00000718.3 (ATMRP8, MRP8, ABCC6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation