LOC_Os01g73430 (Os01g0965000)

Aliases : Os01g0965000

Description : 27.2 RNA.transcription Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. nuclear RNA polymerase D1B (NRPD1B)

Gene families : OG_01_0006037 (Gene family) Phylogenetic Tree(s): OG0006037_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g73430
Cluster HCCA cluster: Cluster_189

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan
BP GO:0006351 transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 325 485
IPR007080 RNA_pol_Rpb1_1 19 291
No external refs found!