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  5. Cpa|evm.model.tig00000663.21

Cpa|evm.model.tig00000663.21 (ATARFA1F, ARFA1F)


Aliases : ATARFA1F, ARFA1F

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000663.21
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT3G62290 ARFA1E, ATARFA1E ADP-ribosylation factor A1E 0.01 OrthoFinder output from all 47 species
Adi_g110620 ATARFA1F, ARFA1F not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g39673 ATARFA1F, ARFA1F not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0170.g055577 No alias not classified & original description: CDS=1-285 0.02 OrthoFinder output from all 47 species
Azfi_s1372.g102367 No alias not classified & original description: CDS=1-285 0.02 OrthoFinder output from all 47 species
Cre12.g487850 ATARFB1B, ARFB1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dac_g04124 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30050 No alias ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Gb_00987 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
MA_101085g0010 ARFA1E, ATARFA1E ARF-GTPase 0.01 OrthoFinder output from all 47 species
Pir_g27174 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g05142 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g16806 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species
Zm00001e015538_P002 ATARFB1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species
Zm00001e031984_P002 ATARFA1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 7 132
No external refs found!