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  5. Cpa|evm.model.tig00000640.11

Cpa|evm.model.tig00000640.11 (ATCRE1, WOL, CRE1, AHK4, WOL1)


Aliases : ATCRE1, WOL, CRE1, AHK4, WOL1

Description : Probable histidine kinase 4 OS=Oryza sativa subsp. japonica


Gene families : OG0001524 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000640.11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 HK5, AHK5, CKI2 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.33 ATCRE1, WOL,... Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Cre02.g074150 AHK1, HK1, ATHK1 Histidine kinase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ppi_g28376 HK3, AHK3 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 571 634
IPR001789 Sig_transdc_resp-reg_receiver 944 1046
IPR001789 Sig_transdc_resp-reg_receiver 1109 1228
IPR003594 HATPase_C 690 749
No external refs found!