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  5. Cpa|evm.model.tig00000622.21

Cpa|evm.model.tig00000622.21


Description : Protein TAB2 homolog, chloroplastic OS=Zea mays


Gene families : OG0004008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000622.21
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Ala_g09787 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04128 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04239 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031031 ATAB2 not classified & original description: CDS=196-1422 0.01 OrthoFinder output from all 47 species
Ceric.21G068300.1 ATAB2, Ceric.21G068300 not classified & original description: pacid=50604093... 0.01 OrthoFinder output from all 47 species
Cre17.g702500 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g14997 ATAB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g04344 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05805 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032129001 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_34984 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Gb_34986 ATAB2 Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g43889 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30744 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430622g0010 ATAB2 Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Mp1g14850.1 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g01898 ATAB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02783 ATAB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03703 ATAB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g005200.4.1 ATAB2, Solyc02g005200 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g10068 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015079_P001 ATAB2, Zm00001e015079 Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR009472 Tab2-like 166 253
IPR009472 Tab2-like 288 394
No external refs found!