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  5. Cpa|evm.model.tig00000615.75

Cpa|evm.model.tig00000615.75


Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component


Gene families : OG0004513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.75
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00246340 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
AT4G24820 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.1 OrthoFinder output from all 47 species
Adi_g014551 No alias regulatory component *(RPN7) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ala_g01282 No alias regulatory component *(RPN7) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Als_g13037 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aob_g01746 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00533 No alias regulatory component *(RPN7) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68842.t1 Aspi01Gene68842 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10280 No alias regulatory component *(RPN7) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.15G063400.1 Ceric.15G063400 regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cre13.g581450 No alias Protein degradation.26S proteasome.regulatory... 0.17 OrthoFinder output from all 47 species
Dac_g01463 No alias regulatory component *(RPN7) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Dcu_g08722 No alias regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01007538001 No alias Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Gb_07144 No alias regulatory component RPN7 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os02g38810.1 LOC_Os02g38810 regulatory component RPN7 of 26S proteasome 0.01 OrthoFinder output from all 47 species
LOC_Os04g40850.1 LOC_Os04g40850 regulatory component RPN7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Len_g07648 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
MA_10428103g0010 No alias regulatory component RPN7 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp1g10100.1 No alias regulatory component RPN7 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Pir_g01571 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002954 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo146093 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Solyc07g009140.3.1 Solyc07g009140 regulatory component RPN7 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Spa_g50785 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g03264 No alias regulatory component *(RPN7) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Zm00001e007775_P001 Zm00001e007775 regulatory component RPN7 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Zm00001e015028_P002 Zm00001e015028 regulatory component RPN7 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 256 356
IPR019585 Rpn7/CSN1 65 238
No external refs found!