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  5. Cpa|evm.model.tig00000615.50

Cpa|evm.model.tig00000615.50


No description available


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.50

Target Alias Description ECC score Gene Family Method Actions
Ala_g05069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G037800.1 Ceric.03G037800 not classified & original description: pacid=50571745... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.51 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01019366001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_28330 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g02350.1 LOC_Os08g02350 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os08g02354.1 LOC_Os08g02354 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g05470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023047 No alias not classified & original description: CDS=181-6594 0.02 OrthoFinder output from all 47 species
Sam_g17461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo406559 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR031642 VPS13_mid_RBG 570 681
IPR031646 VPS13_extend_chorein 144 202
IPR031645 VPS13_DH-like 2215 2307
IPR031645 VPS13_DH-like 2320 2368
IPR009543 VPS13_VAB 1933 1985
IPR009543 VPS13_VAB 1781 1892
IPR026854 VPS13-like_N 2 112
No external refs found!