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  5. Cpa|evm.model.tig00000600.8

Cpa|evm.model.tig00000600.8


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SFT12 group protein


Gene families : OG0002346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000600.8

Target Alias Description ECC score Gene Family Method Actions
AT4G14455 BS14B, BET12,... Target SNARE coiled-coil domain protein 0.03 OrthoFinder output from all 47 species
Adi_g022581 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Aob_g02610 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Aspi01Gene49091.t1 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cba_g12291 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.15G058500.1 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cre03.g198100 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Len_g03060 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
MA_13274g0010 ATBS14A, BET11,... Bs14 group Qc-type SNARE protein 0.01 OrthoFinder output from all 47 species
Nbi_g00249 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Pir_g65117 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Tin_g18651 ATBS14A, BET11,... Qc-type Bs14-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Zm00001e003875_P001 ATBS14A, BET11,... Bs14 group Qc-type SNARE protein 0.02 OrthoFinder output from all 47 species
Zm00001e016253_P001 ATBS14A, BET11,... Bs14 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!