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  5. Cpa|evm.model.tig00000572.7

Cpa|evm.model.tig00000572.7


No description available


Gene families : OG0001607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000572.7

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g39250.1 EDM2, LOC_Os08g39250 chromatin-associated epigenetic factor 0.02 OrthoFinder output from all 47 species
Nbi_g21949 EDM2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13263 EDM2 component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... 0.01 OrthoFinder output from all 47 species
Ppi_g56568 EDM2 component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009791 EDM2 not classified & original description: CDS=1-579 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016350 EDM2 not classified & original description: CDS=1-1062 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!