Cpa|evm.model.tig00000572.5 (PGP1, ABCB1, ATPGP1)

Aliases : PGP1, ABCB1, ATPGP1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000572.5
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
Aev_g20043	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g40617	PGP10	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene62053.t1	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g21294	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
MA_10436810g0020	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006646	PGP20	subfamily ABCB transporter & original description: CDS=24-3872	0.01	OrthoFinder output from all 47 species
Tin_g12815	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e003866_P001	PGP1, ABCB1,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	759	896
IPR003439	ABC_transporter-like_ATP-bd	114	259
IPR011527	ABC1_TM_dom	428	714

External Links

No external refs found!