LOC_Os01g72220 (Os01g0951000)


Aliases : Os01g0951000

Description : 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal. FY


Gene families : OG_01_0006332 (Gene family) Phylogenetic Tree(s): OG0006332_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g72220
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cre06.g251951 No alias 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a... 0.01 Gene family
GSVIVT01013527001 No alias 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a... 0.02 Gene family
Solyc08g067040.3.1 Solyc08g067040.3 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a... 0.02 Gene family
Zm00001d042091 GRMZM5G881296 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 216 246
IPR001680 WD40_repeat 2 34
IPR001680 WD40_repeat 82 119
IPR001680 WD40_repeat 167 203
IPR001680 WD40_repeat 124 161
IPR001680 WD40_repeat 46 77
No external refs found!