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  5. Cpa|evm.model.tig00000571.47

Cpa|evm.model.tig00000571.47


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit


Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000571.47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00173980 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.06 OrthoFinder output from all 47 species
Adi_g011435 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Ala_g06734 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Aop_g02559 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Azfi_s0390.g067696 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Ceric.01G032800.1 Ceric.01G032800 subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 OrthoFinder output from all 47 species
Dcu_g05555 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.01 OrthoFinder output from all 47 species
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g36700.1 LOC_Os06g36700 CCT5 subunit epsilon of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Len_g15605 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Lfl_g19360 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Pp3c20_23570V3.1 Pp3c20_23570 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Sam_g18778 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Smo158694 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Solyc05g013990.3.1 Solyc05g013990 CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Spa_g12182 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Tin_g01058 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Zm00001e011557_P001 Zm00001e011557 CCT5 subunit epsilon of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Zm00001e032727_P001 Zm00001e032727 CCT5 subunit epsilon of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 40 518
No external refs found!