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  5. Cpa|evm.model.tig00000545.18

Cpa|evm.model.tig00000545.18 (RPN12a)


Aliases : RPN12a

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component


Gene families : OG0004469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000545.18
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00218440 RPN12a,... Protein degradation.26S proteasome.regulatory... 0.01 OrthoFinder output from all 47 species
AT1G64520 RPN12a regulatory particle non-ATPase 12A 0.12 OrthoFinder output from all 47 species
Adi_g083286 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Ala_g14019 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g23467 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene68671.t1 RPN12a, Aspi01Gene68671 regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cba_g15778 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.37G039700.1 RPN12a, Ceric.37G039700 regulatory component *(RPN12) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Cre17.g708300 RPN12a Protein degradation.26S proteasome.regulatory... 0.18 OrthoFinder output from all 47 species
Dcu_g02529 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Dde_g20460 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01019594001 RPN12a Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os07g25420.1 RPN12a, LOC_Os07g25420 regulatory component RPN12 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Len_g22597 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Lfl_g01095 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
MA_10426182g0010 RPN12a no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_17736g0010 RPN12a regulatory component RPN12 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Mp5g15930.1 RPN12a regulatory component RPN12 of 26S proteasome 0.11 OrthoFinder output from all 47 species
Nbi_g06575 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pir_g15632 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c14_17630V3.1 RPN12a, Pp3c14_17630 regulatory particle non-ATPase 12A 0.01 OrthoFinder output from all 47 species
Ppi_g05619 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Sam_g08372 No alias regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g30109 No alias regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc08g082700.3.1 RPN12a, Solyc08g082700 regulatory component RPN12 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Spa_g09640 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Spa_g44782 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Tin_g04963 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e016574_P001 RPN12a, Zm00001e016574 regulatory component RPN12 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e040025_P001 RPN12a, Zm00001e040025 regulatory component RPN12 of 26S proteasome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR033464 CSN8_PSD8_EIF3K 109 239
No external refs found!