Mp1g20320.1


Description : component THOC2/Tho2 of mRNP trafficking THO subcomplex


Gene families : OG_01_0003473 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003473_tree ,
OG_02_0005015 (LandPlants) Phylogenetic Tree(s): OG_02_0005015_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g20320.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00044110 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.05 Archaeplastida
AT1G24706 THO2, AtTHO2 THO2 0.11 Archaeplastida
Cpa|evm.model.tig00001428.15 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Cpa|evm.model.tig00001636.2 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Cre12.g507700 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
GSVIVT01011619001 No alias RNA processing.messenger ribonucleoprotein particle... 0.13 Archaeplastida
Gb_33812 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.09 Archaeplastida
LOC_Os01g68810.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.03 Archaeplastida
MA_10430572g0010 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.08 Archaeplastida
MA_10431208g0010 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.02 Archaeplastida
MA_9541851g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_9974463g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c11_17570V3.1 No alias THO2 0.15 Archaeplastida
Smo173562 No alias RNA processing.messenger ribonucleoprotein particle... 0.09 Archaeplastida
Solyc05g017890.4.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.09 Archaeplastida
Zm00001e020164_P001 No alias No annotation 0.1 Archaeplastida
AMTR_s00138p00044110 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.04 LandPlants
AT1G24706 THO2, AtTHO2 THO2 0.11 LandPlants
GSVIVT01011619001 No alias RNA processing.messenger ribonucleoprotein particle... 0.12 LandPlants
Gb_33812 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.08 LandPlants
LOC_Os01g68810.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.03 LandPlants
MA_10430572g0010 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.06 LandPlants
Pp3c11_17570V3.1 No alias THO2 0.13 LandPlants
Smo173562 No alias RNA processing.messenger ribonucleoprotein particle... 0.08 LandPlants
Solyc05g017890.4.1 No alias component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.09 LandPlants
Zm00001e020164_P001 No alias No annotation 0.1 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021418 THO_THOC2_C 927 1221
IPR032302 THOC2_N 441 596
IPR032302 THOC2_N 36 412
IPR021726 THO_THOC2_N 598 673
No external refs found!