LOC_Os01g71050 (Os01g0936800)


Aliases : Os01g0936800

Description : 31.4 cell.vesicle transport Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER. vamp/synaptobrevin-associated protein 27-2 (VAP27-2)


Gene families : OG_01_0000326 (Gene family) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g71050
Cluster HCCA cluster: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017816001 No alias 29.3.4.1 protein.targeting.secretory pathway.ER Encodes... 0.02 Gene family
LOC_Os04g46780 Os04g0554200 No description available 0.03 Gene family
Solyc01g067720.3.1 Solyc01g067720.3 31.4 cell.vesicle transport Encodes VAP33-like protein... 0.02 Gene family
Solyc01g090910.3.1 Solyc01g090910.3 28.99 DNA.unspecified Encodes VAP27 (for... 0.03 Gene family
Zm00001d025939 GRMZM2G155543 29.3.4.1 protein.targeting.secretory pathway.ER Encodes... 0.02 Gene family
Zm00001d042180 GRMZM2G053273,... 31.4 cell.vesicle transport Encodes VAP33-like protein... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000535 MSP_dom 8 102
No external refs found!