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  5. Cpa|evm.model.tig00000405.50

Cpa|evm.model.tig00000405.50 (TOPP4)


Aliases : TOPP4

Description : Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP1 phosphatase


Gene families : OG0000848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000405.50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00079470 TOPP4,... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Adi_g022933 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Adi_g083203 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Ala_g07962 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Als_g12790 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Cba_g32715 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G071600.1 TOPP4, Ceric.32G071600 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Cre06.g292550 TOPP4 Protein modification.dephosphorylation.serine/threonine... 0.06 OrthoFinder output from all 47 species
LOC_Os01g24750.1 LOC_Os01g24750 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
LOC_Os08g35440.1 TOPP4, LOC_Os08g35440 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Ore_g25270 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Pir_g11683 TOPP4 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Solyc06g005800.3.1 TOPP2, PPO,... PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Solyc06g053630.3.1 TOPP4, Solyc06g053630 PP1 phosphatase 0.02 OrthoFinder output from all 47 species
Solyc06g076430.3.1 TOPP2, PPO,... PP1 phosphatase 0.01 OrthoFinder output from all 47 species
Zm00001e026746_P001 Zm00001e026746 PP1 phosphatase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 57 235
IPR031675 STPPase_N 8 55
No external refs found!