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  5. Cpa|evm.model.tig00000403.18

Cpa|evm.model.tig00000403.18 (NQR)


Aliases : NQR

Description : Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana


Gene families : OG0001335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000403.18
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0013.g013425 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.01 OrthoFinder output from all 47 species
Azfi_s0043.g026990 HSD1, ATHSD1 STEROLEOSIN-type dehydrogenase & original description: CDS=1-1173 0.01 OrthoFinder output from all 47 species
Azfi_s0155.g053581 HSD1, ATHSD1 not classified & original description: CDS=1-711 0.01 OrthoFinder output from all 47 species
Solyc03g097440.3.1 HSD1, ATHSD1,... steroleosin 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 8 190
No external refs found!