Cpa|evm.model.tig00000388.18

Description : RNA biosynthesis.transcriptional activation.NIN-like superfamily.RKD transcription factor

Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000388.18

Target	Alias	Description	ECC score	Gene Family Method
Adi_g089976	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03895	No alias	SMARCF component *(LFR) of SWI/SNF chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Aspi01Gene37702.t1	Aspi01Gene37702	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014923	No alias	RKD-type transcription factor & original description:...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000178	exosome (RNase complex)	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
CC	GO:0008303	caspase complex	IEP	HCCA
BP	GO:0016255	attachment of GPI anchor to protein	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
CC	GO:0042765	GPI-anchor transamidase complex	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1905354	exoribonuclease complex	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003035	RWP-RK_dom	21	67

External Links

No external refs found!