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  5. Cpa|evm.model.tig00000385.16

Cpa|evm.model.tig00000385.16


No description available


Gene families : OG0002819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000385.16

Target Alias Description ECC score Gene Family Method Actions
AT2G31890 ATRAP, RAP RAP 0.02 OrthoFinder output from all 47 species
Ala_g02427 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08359 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.01 OrthoFinder output from all 47 species
Cre06.g278173 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01038263001 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
LOC_Os03g31150.3 ATRAP, RAP,... RAP domain-containing protein, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species
MA_8868156g0010 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp2g23920.1 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Mp2g23930.1 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Msp_g14275 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g24589 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo412574 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Smo413123 ATRAP, RAP RAP domain-containing protein, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e016550_P002 ATRAP, RAP,... RAP domain-containing protein, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013584 RAP 753 797
No external refs found!