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  5. Cpa|evm.model.tig00000383.32

Cpa|evm.model.tig00000383.32 (CCH1, GUN5, CHLH, CCH, ABAR)


Aliases : CCH1, GUN5, CHLH, CCH, ABAR

Description : Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0002227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000383.32

Target Alias Description ECC score Gene Family Method Actions
AT5G13630 CCH1, GUN5,... magnesium-chelatase subunit chlH, chloroplast, putative... 0.01 OrthoFinder output from all 47 species
Ala_g09006 CCH1, GUN5,... abscisic acid perception modulator *(ABAR) & original... 0.02 OrthoFinder output from all 47 species
MA_108278g0010 CCH1, GUN5,... component CHL-H of magnesium-chelatase complex. ABAR... 0.01 OrthoFinder output from all 47 species
Mp8g10280.1 CCH1, GUN5,... component CHL-H of magnesium-chelatase complex. ABAR... 0.01 OrthoFinder output from all 47 species
Solyc04g015750.3.1 CCH1, GUN5,... component CHL-H of magnesium-chelatase complex. ABAR... 0.03 OrthoFinder output from all 47 species
Spa_g19551 CCH1, GUN5,... not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016851 magnesium chelatase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR003672 CobN/Mg_chltase 235 494
IPR003672 CobN/Mg_chltase 587 689
IPR003672 CobN/Mg_chltase 811 1209
IPR022571 Mg_chelatase_H_N 73 231
No external refs found!