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  5. Cpa|evm.model.tig00000367.38

Cpa|evm.model.tig00000367.38 (TLP2, AtTLP2)


Aliases : TLP2, AtTLP2

Description : RNA biosynthesis.transcriptional activation.TUB transcription factor


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000367.38

Target Alias Description ECC score Gene Family Method Actions
Adi_g054676 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g054677 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g01271 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g13904 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31258.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G036400.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g22300 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25370 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009566 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=1-432 0.02 OrthoFinder output from all 47 species
Sam_g50956 No alias TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e015581_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 103 188
IPR000007 Tubby_C 197 319
No external refs found!