Cpa|evm.model.tig00000361.33 (PHYC)

Aliases : PHYC

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor

Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000361.33

Target	Alias	Description	ECC score	Gene Family Method
AT4G16250	PHYD	phytochrome D	0.01	OrthoFinder output from all 47 species
Dcu_g08852	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07141	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.01	OrthoFinder output from all 47 species
Gb_17897	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor (PHY). temperature sensor...	0.03	OrthoFinder output from all 47 species
MA_10435530g0010	HY3, OOP1, PHYB	phytochrome photoreceptor (PHY). temperature sensor...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012090	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description:...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	279	327
IPR003018	GAF	513	655
IPR013654	PAS_2	393	485

External Links

No external refs found!