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  5. Cpa|evm.model.tig00000350.15

Cpa|evm.model.tig00000350.15 (ATMRE11, MRE11)


Aliases : ATMRE11, MRE11

Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component


Gene families : OG0004519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000350.15

Target Alias Description ECC score Gene Family Method Actions
AT5G54260 ATMRE11, MRE11 DNA repair and meiosis protein (Mre11) 0.02 OrthoFinder output from all 47 species
Aop_g15412 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.01 OrthoFinder output from all 47 species
Ceric.07G079200.1 ATMRE11, MRE11,... component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.01 OrthoFinder output from all 47 species
Dac_g06507 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.02 OrthoFinder output from all 47 species
Len_g58375 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.01 OrthoFinder output from all 47 species
MA_10426539g0010 ATMRE11, MRE11 Double-strand break repair protein MRE11 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp2g11510.1 ATMRE11, MRE11 component MRE11 of MRE11-RAD50-NBS1 (MRN) complex.... 0.01 OrthoFinder output from all 47 species
Ore_g20474 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.01 OrthoFinder output from all 47 species
Tin_g08859 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006302 double-strand break repair IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007281 Mre11_DNA-bd 276 441
No external refs found!