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  5. Cpa|evm.model.tig00000241.128

Cpa|evm.model.tig00000241.128 (RPT1, PHOT1, NPH1, JK224)


Aliases : RPT1, PHOT1, NPH1, JK224

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.128
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Aev_g20664 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Ceric.24G066200.1 NPL1, PHOT2,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g07913 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g12546 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Gb_28975 RPT1, PHOT1, NPH1, JK224 protein kinase (AGC-VIII) 0.01 OrthoFinder output from all 47 species
LOC_Os11g01140.1 RPT1, PHOT1,... protein kinase (AGC-VIII). phototropin light receptor.... 0.03 OrthoFinder output from all 47 species
Nbi_g03842 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Sam_g04034 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 29 78
IPR000014 PAS 698 795
IPR000014 PAS 539 620
No external refs found!