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  5. Cpa|evm.model.tig00000227.25

Cpa|evm.model.tig00000227.25


Description : CSC1-like protein ERD4 OS=Arabidopsis thaliana


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000227.25

Target Alias Description ECC score Gene Family Method Actions
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21986.t1 HYP1, ATHYP1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57219.t1 Aspi01Gene57219 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044705 No alias calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G034200.1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Cre08.g360600 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
Cre17.g738150 ERD4 CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009282001 RXW8 Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
GSVIVT01011464001 HYP1, ATHYP1 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Gb_08555 ERD4 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
Len_g24317 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07790 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08382 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g14172 ERD4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g20113 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29118 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Smo41460 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 8 173
IPR003864 CSC1/OSCA1-like_7TM 451 734
No external refs found!