Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit
Gene families : OG0005394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005394_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00000219.44 | |
Cluster | HCCA: Cluster_85 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cba_g01858 | No alias | subunit beta of TFIIf basal transcription factor complex... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g06979 | No alias | subunit beta of TFIIf basal transcription factor complex... | 0.02 | OrthoFinder output from all 47 species | |
MA_10429881g0030 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g13830.1 | No alias | subunit beta of TFIIf basal transcription factor complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027383_P001 | Zm00001e027383 | subunit beta of TFIIf basal transcription factor complex | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR040450 | TFIIF_beta_HTH | 275 | 328 |
No external refs found! |