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  5. Cpa|evm.model.tig00000203.27

Cpa|evm.model.tig00000203.27


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000203.27
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene52444.t1 Aspi01Gene52444 histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018808001 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005529 No alias not classified & original description: CDS=1-426 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202 No alias not classified & original description: CDS=224-661 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!