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  5. Cpa|evm.model.tig00000194.26

Cpa|evm.model.tig00000194.26 (SRCAP, PIE1, chr13)


Aliases : SRCAP, PIE1, chr13

Description : Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana


Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00089520 SRCAP, PIE1,... Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
AT3G12810 SRCAP, PIE1, chr13 SNF2 domain-containing protein / helicase... 0.03 OrthoFinder output from all 47 species
Aev_g17049 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ala_g20021 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ala_g21115 SRCAP, PIE1, chr13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04504 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Als_g11978 SRCAP, PIE1, chr13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13991 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00835.t1 SRCAP, PIE1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00837.t1 SRCAP, PIE1,... ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Cba_g12343 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Ceric.22G011100.1 SRCAP, PIE1,... ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Cre14.g618860 SRCAP, PIE1, chr13 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g08326 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Dcu_g39491 SRCAP, PIE1, chr13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22840 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
GSVIVT01033511001 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.06 OrthoFinder output from all 47 species
Gb_04357 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.02 OrthoFinder output from all 47 species
Gb_04358 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.04 OrthoFinder output from all 47 species
Gb_30810 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Gb_30812 SRCAP, PIE1, chr13 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46450.2 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Len_g28435 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
MA_424432g0010 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.05 OrthoFinder output from all 47 species
MA_64269g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.03 OrthoFinder output from all 47 species
MA_9456975g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.02 OrthoFinder output from all 47 species
Mp7g15670.1 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Nbi_g13998 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Ppi_g56964 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005513 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Solyc03g063220.2.1 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.05 OrthoFinder output from all 47 species
Tin_g20443 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromaTin remodeling... 0.02 OrthoFinder output from all 47 species
Zm00001e015483_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Zm00001e023267_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 647 797
IPR014012 HSA_dom 237 303
No external refs found!