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  5. Cpa|evm.model.tig00000194.25

Cpa|evm.model.tig00000194.25 (SRCAP, PIE1, chr13)


Aliases : SRCAP, PIE1, chr13

Description : Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component


Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.25

Target Alias Description ECC score Gene Family Method Actions
AT3G12810 SRCAP, PIE1, chr13 SNF2 domain-containing protein / helicase... 0.01 OrthoFinder output from all 47 species
Adi_g068325 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g04504 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Ceric.22G011100.1 SRCAP, PIE1,... ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g08326 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
GSVIVT01033511001 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.01 OrthoFinder output from all 47 species
LOC_Os02g46450.2 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.01 OrthoFinder output from all 47 species
Len_g28435 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Mp7g15670.1 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Ore_g38204 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ore_g39992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11854 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Sam_g11626 No alias ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Solyc03g063210.3.1 SRCAP, PIE1,... Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.02 OrthoFinder output from all 47 species
Solyc03g063220.2.1 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Zm00001e015483_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Zm00001e023267_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005891 voltage-gated calcium channel complex IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034704 calcium channel complex IEP HCCA
CC GO:0036128 CatSper complex IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 2 115
IPR001650 Helicase_C 365 477
No external refs found!