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  5. Cpa|evm.model.tig00000144.20

Cpa|evm.model.tig00000144.20


Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP


Gene families : OG0004137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.20

Target Alias Description ECC score Gene Family Method Actions
Adi_g056383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114339 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07828 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G039000.1 Ceric.02G039000 geranylgeranyl reductase *(CHLP) & original description:... 0.05 OrthoFinder output from all 47 species
Cre01.g050950 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 OrthoFinder output from all 47 species
Dac_g01569 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02816 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007996001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Gb_34162 No alias geranylgeranyl reductase (ChlP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51080.1 LOC_Os02g51080 geranylgeranyl reductase (ChlP) 0.03 OrthoFinder output from all 47 species
Len_g03280 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21684 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11797 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_189742g0010 No alias geranylgeranyl reductase (ChlP) 0.01 OrthoFinder output from all 47 species
Mp4g20130.1 No alias geranylgeranyl reductase (ChlP) 0.07 OrthoFinder output from all 47 species
Msp_g07857 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05306 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16810 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16608 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015786 No alias geranylgeranyl reductase *(CHLP) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g16455 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo271030 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
Solyc03g115980.1.1 Solyc03g115980 geranylgeranyl reductase (ChlP) 0.02 OrthoFinder output from all 47 species
Spa_g50719 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04005 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015812_P003 Zm00001e015812 geranylgeranyl reductase (ChlP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
CC GO:0030089 phycobilisome IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 63 95
No external refs found!