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  5. Cpa|evm.model.tig00000076.93

Cpa|evm.model.tig00000076.93 (ATHMG, HMG, SSRP1, NFD)


Aliases : ATHMG, HMG, SSRP1, NFD

Description : Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component


Gene families : OG0003187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000076.93
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Ceric.21G019400.1 ATHMG, HMG,... component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Cre01.g029450 ATHMG, HMG, SSRP1, NFD Chromatin organisation.histone chaperone activities.FACT... 0.02 OrthoFinder output from all 47 species
Ehy_g05922 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011349001 ATHMG, HMG, SSRP1, NFD Chromatin organisation.histone chaperone activities.FACT... 0.01 OrthoFinder output from all 47 species
LOC_Os01g08970.1 ATHMG, HMG,... component SSRP of FACT histone chaperone complex 0.01 OrthoFinder output from all 47 species
Msp_g00661 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR013719 RTT106/SPT16-like_middle_dom 200 281
No external refs found!