No description available
Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00000073.45 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G17560 | NFD4, HMGB4, NFD04 | high mobility group B4 | 0.02 | OrthoFinder output from all 47 species | |
AT3G51880 | NFD1, HMGB1 | high mobility group B1 | 0.01 | OrthoFinder output from all 47 species | |
Adi_g124825 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06219 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Als_g06129 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Als_g22881 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Als_g31169 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g05660 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene17874.t1 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0132.g049182 | NFD2, HMG BETA... | not classified & original description: CDS=249-659 | 0.01 | OrthoFinder output from all 47 species | |
Cre06.g261450 | ATHMG, HMG, SSRP1, NFD | No description available | 0.01 | OrthoFinder output from all 47 species | |
Cre12.g558950 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g13287 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g21071 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g26832 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01026642001 | NFD2, HMG BETA... | HMG1/2-like protein OS=Glycine max | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os09g37910.1 | NFD2, HMG BETA... | HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 99.4) | 0.01 | OrthoFinder output from all 47 species | |
Len_g06895 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05824 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g09223 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g11840 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0013.g005885 | ATHMG, HMG, SSRP1, NFD | not classified & original description: CDS=348-2621 | 0.01 | OrthoFinder output from all 47 species | |
Sam_g12848 | No alias | DNA bending architectural protein *(HMG-B) & original... | 0.01 | OrthoFinder output from all 47 species | |
Solyc02g082700.3.1 | NFD2, HMG BETA... | HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 82.0) | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
MF | GO:0046872 | metal ion binding | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
MF | GO:0042802 | identical protein binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0048037 | obsolete cofactor binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001670 | ADH_Fe/GldA | 24 | 356 |
No external refs found! |