LOC_Os01g64280 (Os01g0862300)


Aliases : Os01g0862300

Description : 29.3.4.3 protein.targeting.secretory pathway.vacuole Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1. sorting nexin 1 (SNX1)


Gene families : OG_01_0003788 (Gene family) Phylogenetic Tree(s): OG0003788_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g64280
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Cre06.g281050 No alias 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.01 Gene family
Smo168332 PACid_15421315 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015404 Vps5_C 165 391
IPR001683 Phox 22 135
No external refs found!