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  5. Cpa|evm.model.tig00000042.17

Cpa|evm.model.tig00000042.17


Description : Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana


Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000042.17
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G55380 UBC14 ubiquitin-conjugating enzyme 14 0.02 OrthoFinder output from all 47 species
AT5G59300 ATUBC7, UBC7 ubiquitin carrier protein 7 0.02 OrthoFinder output from all 47 species
Als_g34436 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Ceric.19G026300.1 ATUBC7, UBC7,... E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Ceric.25G020800.1 ATUBC7, UBC7,... E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Dde_g03680 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Gb_26328 ATUBC7, UBC7 component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
Lfl_g12175 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
MA_96703g0010 ATUBC7, UBC7 component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
Mp4g07670.1 ATUBC7, UBC7 component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.01 OrthoFinder output from all 47 species
Msp_g44292 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Ore_g15776 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012070 UBC13 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.01 OrthoFinder output from all 47 species
Spa_g02541 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Spa_g08333 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Spa_g54620 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 1 87
No external refs found!