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  5. LOC_Os01g61510

LOC_Os01g61510 (Os01g0831300)


Aliases : Os01g0831300

Description : 34.5 transport.ammonium encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2 (AMT2)


Gene families : OG_01_0000580 (Gene family) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g61510
Cluster HCCA cluster: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030328001 No alias 34.5 transport.ammonium encodes a high-affinity ammonium... 0.05 Gene family
MA_226001g0010 No alias 34.5 transport.ammonium encodes a high-affinity ammonium... 0.02 Gene family
Solyc09g065740.2.1 Solyc09g065740.2 34.5 transport.ammonium encodes a high-affinity ammonium... 0.02 Gene family
Solyc10g076480.2.1 Solyc10g076480.2 34.5 transport.ammonium encodes a high-affinity ammonium... 0.03 Gene family
Zm00001d034782 GRMZM2G338809,... 34.5 transport.ammonium encodes a high-affinity ammonium... 0.06 Gene family
Zm00001d038412 GRMZM2G080045 34.5 transport.ammonium encodes a high-affinity ammonium... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA InterProScan
BP GO:0015696 ammonium transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 28 450
No external refs found!