- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AMS
Description : transcriptional regulator *(DYT1/AMS) & original description: none
Gene families : OG0006543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006543_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g34078 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G16910 | AMS | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46165 | AMS | transcriptional regulator *(DYT1/AMS) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013720001 | AMS | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024008001 | AMS | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g02820.1 | AMS, LOC_Os02g02820 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11389 | AMS | transcriptional regulator *(DYT1/AMS) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01138 | AMS | transcriptional regulator *(DYT1/AMS) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g062780.2.1 | AMS, Solyc08g062780 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47867 | AMS | transcriptional regulator *(DYT1/AMS) & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 275 | 318 |
| No external refs found! |