Pnu_g33917 (PUB8, B80)

Aliases : PUB8, B80

Description : E3 ubiquitin ligase *(PUB8) & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g33917

Target	Alias	Description	ECC score	Gene Family Method
Aev_g05890	PUB13, ATPUB13	E3 ubiquitin ligase *(PUB15) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02477	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g19238	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000295	No alias	not classified & original description: CDS=1-2304	0.02	OrthoFinder output from all 47 species
Azfi_s0375.g067244	PUB13, ATPUB13	E3 ubiquitin ligase & original description: CDS=271-2382	0.03	OrthoFinder output from all 47 species
Azfi_s0481.g073128	No alias	not classified & original description: CDS=1-237	0.03	OrthoFinder output from all 47 species
Cba_g31463	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g78060	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g01449	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06975	ATPUB17, PUB17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g15817	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010151	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: CDS=1-1236	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021169	No alias	not classified & original description: CDS=1-882	0.02	OrthoFinder output from all 47 species
Zm00001e018161_P001	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	5	74

External Links

No external refs found!

Pnu_g33917 (PUB8, B80)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation