- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g33911 | |
| Cluster | HCCA: Cluster_118 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G54490 | PBP1 | pinoid-binding protein 1 | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene49045.t1 | PBP1, Aspi01Gene49045 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00593 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g46950.1 | LOC_Os06g46950 | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_25900g0020 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g006660.3.1 | Solyc10g006660 | Calcium-binding protein KRP1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013045_P001 | Zm00001e013045 | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002048 | EF_hand_dom | 53 | 103 |
| No external refs found! |