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  5. Pnu_g33901

Pnu_g33901


Description : not classified & original description: none


Gene families : OG0006183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g33901
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT4G16410 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.03 OrthoFinder output from all 47 species
Adi_g022096 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0207.g057922 No alias not classified & original description: CDS=1-876 0.04 OrthoFinder output from all 47 species
Cre17.g726450 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g26295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004669001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g41630.1 LOC_Os07g41630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g30982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_54338g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g15300.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g22342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e030978_P001 Zm00001e030978 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e036820_P001 Zm00001e036820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR008470 Uncharacterised_Ycf33 165 224
No external refs found!