AMTR_s00052p00100800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00052.29

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase


Gene families : OG_01_0001673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001673_tree ,
OG_02_0001462 (LandPlants) Phylogenetic Tree(s): OG_02_0001462_tree ,
OG_03_0012862 (SeedPlants) Phylogenetic Tree(s): OG_03_0012862_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00052p00100800
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Solyc08g066950.3.1 No alias 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 359 518
IPR005477 Dxylulose-5-P_synthase 33 317
No external refs found!