LOC_Os01g54890 (Os01g0752500)


Aliases : Os01g0752500

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g54890
Cluster HCCA cluster: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.04 Gene family
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.07 Gene family
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.02 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.08 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.02 Gene family
Cre08.g364400 No alias No description available 0.01 Gene family
GSVIVT01013914001 No alias No description available 0.05 Gene family
GSVIVT01013917001 No alias No description available 0.03 Gene family
GSVIVT01013918001 No alias No description available 0.03 Gene family
GSVIVT01018270001 No alias No description available 0.03 Gene family
GSVIVT01018271001 No alias No description available 0.03 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01028314001 No alias No description available 0.04 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036201001 No alias No description available 0.03 Gene family
LOC_Os02g06330 No alias No description available 0.03 Gene family
LOC_Os02g43940 Os02g0656600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08500 Os03g0183300 No description available 0.02 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os06g11940 Os06g0223100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.03 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os09g39850 Os09g0572000 No description available 0.02 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_164803g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_23847g0010 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_329325g0010 No alias No description available 0.03 Gene family
MA_364562g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_912855g0010 No alias No description available 0.02 Gene family
MA_938274g0010 No alias No description available 0.02 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo409196 PACid_15422590 No description available 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.02 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.03 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.04 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.04 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.03 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.03 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.03 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.03 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.04 Gene family
Zm00001d023535 GRMZM2G544539 No description available 0.03 Gene family
Zm00001d027924 GRMZM2G129674 No description available 0.03 Gene family
Zm00001d027929 No alias No description available 0.03 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d032077 GRMZM2G163745 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.03 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.05 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 126 176
No external refs found!