LOC_Os01g54540 (Os01g0749200)


Aliases : Os01g0749200

Description : 29.2.1.1.1.2.13 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13 embryo defective 1473 (emb1473)


Gene families : OG_01_0006747 (Gene family) Phylogenetic Tree(s): OG0006747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g54540
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G78630 emb1473 Ribosomal protein L13 family protein 0.19 Gene family
Cpa|evm.model.tig00020912.24 No alias 29.2.1.1.1.2.13 protein.synthesis.ribosomal... 0.02 Gene family
Cre06.g264350 No alias 29.2.1.1.1.2.13 protein.synthesis.ribosomal... 0.12 Gene family
GSVIVT01014101001 No alias 29.2.1.1.1.2.13 protein.synthesis.ribosomal... 0.06 Gene family
MA_10433400g0010 No alias 29.2.1.1.1.2.13 protein.synthesis.ribosomal... 0.05 Gene family
Solyc07g062190.3.1 Solyc07g062190.3 29.2.1.1.1.2.13 protein.synthesis.ribosomal... 0.06 Gene family
Solyc12g014395.1.1 Solyc12g014395.1 29.2.1.1.1.2.13 protein.synthesis.ribosomal... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 96 218
No external refs found!