Mp1g05560.1


Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)


Gene families : OG_01_0003861 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003861_tree ,
OG_02_0006681 (LandPlants) Phylogenetic Tree(s): OG_02_0006681_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g05560.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00245860 evm_27.TU.AmTr_v1... RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 Archaeplastida
AT2G13540 ATCBP80, ABH1, ENS, CBP80 ARM repeat superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00021589.24 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 Archaeplastida
Cre12.g524100 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.07 Archaeplastida
GSVIVT01037230001 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.05 Archaeplastida
Gb_13655 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 Archaeplastida
LOC_Os03g22570.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.1 Archaeplastida
MA_10436272g0010 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.05 Archaeplastida
MA_13750g0010 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 Archaeplastida
Pp3c5_6600V3.1 No alias ARM repeat superfamily protein 0.02 Archaeplastida
Pp3c6_18600V3.1 No alias ARM repeat superfamily protein 0.05 Archaeplastida
Smo115849 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.05 Archaeplastida
Solyc10g005530.3.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.08 Archaeplastida
Zm00001e001643_P004 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.06 Archaeplastida
AMTR_s00029p00245860 evm_27.TU.AmTr_v1... RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 LandPlants
AT2G13540 ATCBP80, ABH1, ENS, CBP80 ARM repeat superfamily protein 0.03 LandPlants
GSVIVT01037230001 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.04 LandPlants
Gb_13655 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 LandPlants
LOC_Os03g22570.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.1 LandPlants
MA_10436272g0010 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.04 LandPlants
Pp3c5_6600V3.1 No alias ARM repeat superfamily protein 0.01 LandPlants
Pp3c6_18600V3.1 No alias ARM repeat superfamily protein 0.05 LandPlants
Smo115849 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.04 LandPlants
Solyc10g005530.3.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.07 LandPlants
Zm00001e001643_P004 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016070 RNA metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015174 MIF4G-like_typ-2 489 843
IPR015172 MIF4G-like_typ-1 347 470
IPR003890 MIF4G-like_typ-3 33 206
No external refs found!