Pnu_g33344


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g33344
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT5G44230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11489 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26694 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26781 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30201 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029919 No alias not classified & original description: CDS=1-2448 0.02 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.04 OrthoFinder output from all 47 species
Azfi_s0440.g070304 CRR22 not classified & original description: CDS=1-2568 0.03 OrthoFinder output from all 47 species
Azfi_s0515.g074972 No alias not classified & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Cba_g07667 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Len_g19028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57968 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57980 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15493 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16161 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g23593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g29945 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007869 No alias not classified & original description: CDS=1-2253 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025088 No alias not classified & original description: CDS=1-2760 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026691 No alias not classified & original description: CDS=1-2898 0.03 OrthoFinder output from all 47 species
Sam_g08419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo97139 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Spa_g24639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species
Zm00001e037542_P001 Zm00001e037542 Pentatricopeptide repeat-containing protein At4g16470... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 221
IPR002885 Pentatricopeptide_repeat 255 285
IPR002885 Pentatricopeptide_repeat 224 253
IPR002885 Pentatricopeptide_repeat 429 454
IPR002885 Pentatricopeptide_repeat 556 595
IPR002885 Pentatricopeptide_repeat 355 402
IPR002885 Pentatricopeptide_repeat 455 502
No external refs found!