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  5. Pnu_g33169

Pnu_g33169 (HB-1)


Aliases : HB-1

Description : component *(RINGLET/RLT) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g33169

Target Alias Description ECC score Gene Family Method Actions
Aop_g09051 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g16445 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Len_g13913 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ore_g29882 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Zm00001e006057_P001 Zm00001e006057 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 1174 1246
IPR007759 Asxl_HARE-HTH 777 845
IPR018501 DDT_dom 597 651
IPR001356 Homeobox_dom 15 69
IPR028942 WHIM1_dom 1002 1040
No external refs found!