LOC_Os01g48290 (Os01g0673700)


Aliases : Os01g0673700

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Dof-type zinc finger DNA-binding family protein


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g48290
Cluster HCCA cluster: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.04 Gene family
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 Gene family
GSVIVT01002242001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01024986001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01027184001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01034189001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
LOC_Os04g58190 Os04g0678400 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os05g36900 Os05g0440000 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os09g29960 Os09g0475800 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
LOC_Os10g35300 Os10g0496000 No description available 0.02 Gene family
Smo89924 PACid_15413201 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc02g077960.2.1 Solyc02g077960.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.08 Gene family
Solyc02g090220.3.1 Solyc02g090220.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc02g090310.1.1 Solyc02g090310.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc03g115940.3.1 Solyc03g115940.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc03g121400.1.1 Solyc03g121400.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc06g069385.1.1 Solyc06g069385.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc09g010680.3.1 Solyc09g010680.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc11g072500.2.1 Solyc11g072500.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d001824 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d005970 GRMZM2G009406 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d012280 GRMZM2G042218 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d014198 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d017900 GRMZM2G394941 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d021591 GRMZM2G134545,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d026628 GRMZM2G142718 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d030727 GRMZM2G123900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d032578 GRMZM2G456452 No description available 0.03 Gene family
Zm00001d032999 GRMZM2G138455 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d033093 GRMZM2G011832 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d033325 GRMZM2G045678 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d034163 GRMZM2G108865 16.5.1.2.3 secondary... 0.03 Gene family
Zm00001d038281 GRMZM2G371058 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d051700 GRMZM2G449950 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 83 136
No external refs found!