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  5. Pnu_g33062

Pnu_g33062 (ATRAD21.3, SYN4)


Aliases : ATRAD21.3, SYN4

Description : mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex & original description: none


Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g33062
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00146690 ATRAD21.3, SYN4,... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Ceric.31G015800.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Ehy_g17726 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Gb_15721 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component SCC1 of cohesin... 0.02 OrthoFinder output from all 47 species
MA_10427350g0010 ATRAD21.3, SYN4 Sister chromatid cohesion 1 protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sam_g27905 No alias mitotic-specific Kleisin-type component *(SCC1) of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR006910 Rad21_Rec8_N 1 100
IPR006909 Rad21/Rec8_C_eu 1808 1854
No external refs found!