LOC_Os01g47360 (Os01g0662800)


Aliases : Os01g0662800

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 19 (GATA19)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g47360
Cluster HCCA cluster: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G45050 GATA2 GATA transcription factor 2 0.04 Gene family
AT3G50870 HAN, MNP, GATA18 GATA type zinc finger transcription factor family protein 0.03 Gene family
AT3G60530 GATA4 GATA transcription factor 4 0.02 Gene family
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.02 Gene family
AT4G32890 GATA9 GATA transcription factor 9 0.02 Gene family
AT5G49300 GATA16 GATA transcription factor 16 0.02 Gene family
GSVIVT01018833001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
GSVIVT01024194001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os05g44400 Os05g0520300 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os05g49280 Os05g0567900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
MA_92522g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Solyc01g060490.3.1 Solyc01g060490.3 No description available 0.02 Gene family
Solyc02g085190.2.1 Solyc02g085190.2 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.06 Gene family
Solyc03g033660.3.1 Solyc03g033660.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Solyc08g066510.3.1 Solyc08g066510.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc09g091250.3.1 Solyc09g091250.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Zm00001d011771 GRMZM2G138967 No description available 0.02 Gene family
Zm00001d012757 GRMZM2G044576 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d017409 GRMZM2G140669 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.13 Gene family
Zm00001d025953 GRMZM2G054615 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d029896 GRMZM2G113098 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d034751 GRMZM2G114775 No description available 0.04 Gene family
Zm00001d038801 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d039113 GRMZM2G325850 No description available 0.02 Gene family
Zm00001d043969 GRMZM2G123909 No description available 0.06 Gene family
Zm00001d047081 GRMZM2G101058 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d051981 GRMZM2G379005 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 124 158
No external refs found!